MultiAssayExperiment

MultiAssayExperiment copied to clipboard

`na.rm` argument in `subsetByColData`

4

Referring to the discussion in https://github.com/waldronlab/MultiAssayExperiment/issues/303 Please allow user to specify `na.rm` in `subsetByColData` to return data without any errors when column contains `NAs` ```r library(MultiAssayExperiment) subsetByColData(miniACC, DF$race == "white")...

gogonzo

Using intersectRows when different names are used for the same entity

8

I have one dataset of 16 S sequencing of intestinal biopsies and another one from the stools which end up into different OTUs. I can find to which taxa does...

llrs

Error in h5checktype(). The provided H5Identifier is not a dataset identifier.

6

Hi Sorry, I'm unfamiliar with converting between MuData and R format. I am unable to load my h5mu data in. I keep getting "Error in h5checktype(). The provided H5Identifier is...

JHYSiu

Error in `colnames<-,ExperimentList`

3

I am under the impression that I should be able to replace the colnames of the different assays in an `ExperimentList` and a MAE: ```r > showMethods(`colnames

lgatto