VP Nagraj

@seppinho thanks for circling back to this! yeah we put together a method for calculating mito haplogroup lca in R. it's a bit involved: ``` ## script to define functions...

i guess the v1.1.2 release (https://github.com/reconhub/epicontacts/issues/124) is as good a time as any to update the website :) just pushed a rebuild and have a PR at https://github.com/reconhub/epicontacts/pull/127 @finlaycampbell @thibautjombart...

awesome! thanks for digging into the current deployment details. i guess my thought is that *if* we consider the `master`/`main` branch to be the home of the "stable" version of...

@thibautjombart ... i just opened a PR with a GitHub action to automate the pkgdown site build and deploy to a gh-pages branch: https://github.com/reconhub/epicontacts/pull/128 same setup i've used elsewhere: https://github.com/vpnagraj/twoxtwo/blob/main/.github/workflows/pkgdown.yaml...

@zkamvar great point, i'd prefer to lose the `dplyr` dependency if possible ... i'm working on replacing the joins and printing with base functions

FWIW i can confirm that i'm seeing the mm10 example file now too ... and was able to execute a run with it

@nsheff sure thing but i'm not familiar with `GenomicRanges::resize()` so can you give you me a better idea of where to make that call? after [reading each `.bed`](https://github.com/databio/LOLAweb/blob/master/apps/LOLAweb/app.R#L525)? and given...

@nsheff thanks for checking back in and providing some code to illustrate the idea ... very interesting i've been working through some of the other issues on the `dev` branch...

@nsheff have you seen this post: http://blog.rstudio.com/2018/06/26/shiny-1-1-0/ not sure if this is exactly what you have in mind, but may be useful

@nsheff good call ... any suggestions for how / where to manage the feedback? i vote for using github issues ✅