Vedu Mallela
Vedu Mallela
hi @williamscotton , we retrieved the ply files we use for the mice brain renders from the allen institute (https://mouse.brain-map.org/). We applied transforms for these files that enable them to...
@williamscotton , we would likely have to apply the same transforms to the allen institute files and use the files corresponding with those regions. I just checked and found the...
@williamscotton my mistake, I thought you were referring to the mice atlas. I'm not sure entirely sure how it would work for the human atlas, we would probably have to...
sorry for the late reply @araikes. if the mouse atlas comes in .ply (or a similar format) files, it wouldn't be difficult at all but if we need to run...
@araikes when I transformed the ply files from the allen atlas I manually fit them together in order to make the full brain through the blender software. when you segment...
@araikes when we did the mice brain atlas, we retrieved the already converted voxelized segmentations from the allen institute and ran transformations on them in order to be compatible with...
perfect! you can send them to me at [email protected]. I'll get those up to brainpainter asap and i'll ping you here once they're uploaded on the software. Thanks!
that'd be perfect. Thank you
got it! thanks. I'll try to get some of this done by tonight.
@pandora523 Mac Sonoma is still in preview, and thus might have some errors running stable diffusion. Are you also running the xcode 15 beta (with xcode command line tools installed)?