Max

singularity is depricated

1

using new `container`

5_prime_UTR_intronic_variant & 3_prime_UTR_intronic_variant

4

Right now we would classify an intronic variant between two UTRs exons as a `coding_transcript_intron_variant`. But would like to decide between these two classes and would suggest the two new...

WorkflowError when creating report using -j/--jobs instead of -c

2

**7.3.8** **Describe the bug** When running `snakemake --report report.html --jobs 1` I get an WorkflowError: ``` WorkflowError in line 7 of /data/projects/MPRAsnakeflow/MPRAsnakeflow/workflow/rules/statistic/counts.smk: Resource _nodes is of type int but global...

CLI is not good tested right now. We need more examples especially with the additional annotations.

**Snakemake version** 9.5.1 **Describe the bug** The recently introduced fix in 9.5.1: - skip unnecessary schema validation inside of remote jobs ([#3601](https://github.com/snakemake/snakemake/issues/3601)) ([9129654](https://github.com/snakemake/snakemake/commit/91296543360e276a2317c8831b6635c29839afd2)) causes crashing of remote jobs when schemas...