Geraldine Van der Auwera

Feature request: volume mounting

14

To address the type of use case described in http://gatkforums.broadinstitute.org/gatk/discussion/comment/38188#Comment_38188

Add a function to get a list of the values from a Map

3

I have a `Map[String,File]` from which I want to extract the values into an `Array[File]`, that would be equivalent to eg the Java expression `List list = map.values`. **Justification:** I...

Combining docker-pulls and github-monitoring?

2

Hi @vegasbrianc, thank you so much for sharing your work! I have a (probably dumb) question about using this in practice: I want to combine both your docker-pulls dashboard and...

Cover use of multiple input channels

2

Either in Hello World or a generic Part 2 (before Hello GATK)

In the Hello nf-test section (2.3) the use of the setup method is more like an integration test than a unit test. This was a viewer comment and seemed helpful...

Add -resume step to Hello World

1

People want to know about -resume earlier, could add this in very early

To the Hello Modules section

Current explanation is too technical. We should provide a more accessible explanation, acknowledge it is incomplete and leave full details for later. (for value vs queue, give example of single...

Would be a great way to address follow up questions. "Oh you want to know more about x? here's a self-contained thing that builds off of this simple example."

See https://github.com/nextflow-io/training/commit/936bcdf5b29b5c95547a84f7a281ad494fdfe70f#r146005751