vbrow29

Seeing no performance gains with larger batch_size on 3D images

1

Hello, I am using the distributed cellpose module to run inference on a terabyte-scale 3D image (~5000x10000x10000 ZYX). I would like to use as much RAM + VRAM as possible...

I have been using the distributed module to run nuclei segmentation on a large light-sheet microscopy dataset. It mostly works well, but I noticed when quantifying morphological features for each...