Shaoning Li
Shaoning Li
What RFdiffusion is done: 1. Generate $x^{t+\Delta}$; 2. Employ `ReversteStep` to generate $x^{t}$; 3. Use RFdiffusion to predict $\tilde{x}_0$ and stop gradient; 4. Use $x^{t}$ and $\tilde{x}_0$ as input of...
Warning would be, for example, `Failed to parse /data/all_structures/chothia/7ssh.pdb: invalid literal for int() with base 10: 'X'`
same questions
I make a mmseqs-based MSA pipeline for [alphafold3](https://github.com/v-shaoningli/alphafold3/tree/main/scripts) with full docs. You can try if you're interested.