boba
boba copied to clipboard
Specifying and executing multiverse analysis
Dear Boba-team, we are working on a manuscript about various open science tools in neuroscience, where we plan to include an overview figure with the different tools available. Therefore we...
The scipy version in `requirements.txt` is incompatible with the scipy version in boba-visualizer
1. Add a section for how to report issues 2. Note python version, OS, and other requirements. (Some examples need `requirement.txt`, some needs Rscript and R dependencies) 3. Be clear...
1. Test how much boba is compatible on Windows 2. Make a tutorial on how to install and run it on Windows
I ran a multiverse with about 4,000 universes on 40 processes. About 30 processes were done within the first few minutes, but the remaining took longer than 2 hours to...
Adds decision filter to `boba compile` command, and adds test cases for this new functionality. the decision filter is an optional parameter to the `boba compile` command, specified by using...
For the syntax in BOBA_CONFIG block, we might add to the bottom of this file, alongside `before_execute` and `after_execute`: https://github.com/uwdata/boba/blob/master/tutorial/rules.md For the syntax of the separate JSON spec for the...
We might need a comprehensive description of the available continuous variable syntax in https://github.com/uwdata/boba/blob/master/tutorial/rules.md and perhaps walk the users through the `simple_cont` example in https://github.com/uwdata/boba/blob/master/tutorial/simple.md
Besides the command line interface, we should make it possible for other people to use the Parser class for compiling a multiverse from within python. Now it's possible to import...
The current design of boba constraints has the following caveat: "For placeholder variables, the decision is NOT made at the beginning, but until the placeholder variable first appears in the...