Jennifer Ureta

Hello, Circle map realign is not working when I try to run it on an HPC, it's not outputting any file or any error. I am using the nextflow Circdna...

cnv_prefilter

2

If we are using our own bed file with CNV calls(not using CNVKit), do we need to call cnv_prefilter or is using amplified_intervals.py enough? What additional filtering does cnv_prefilter do?

Circexplorer2 Annotate

1

### Description of feature Hello, Would it be possible to add the annotate module of circexplorer2?

Log file

1

Hi, In the log file, what do the last 2 numbers stand for in this sample line? DEBUG:root:#TIME 1354.095 discordant edges: external edges done chr11 66790539 66809680 1134.3162343502045 91 Regards,...