Tony Tung

Clone of https://github.com/spacetx/starfish/pull/1978

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This is just to trigger the CI.

local_max_peak_finder reports erroneous x/y/z data with cropped datasets

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#### Description If `local_max_peak_finder` is called with a cropped dataset, the x/y/z pixel coordinates in the `PerImageSliceSpotResults` table are the pixel offsets and not the pixel coordinates. https://github.com/spacetx/starfish/blob/1e10dae3a3a2796599be7a3de4e2b8d5ed948ce5/starfish/core/spots/FindSpots/local_max_peak_finder.py#L252-L260

Use 3D border exclusion for ISS

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#### Description See https://github.com/spacetx/starfish/pull/1688 for more details. This is blocked on scikit-image/scikit-image#4325

support for 2D spot detection with TrackPy

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#### Description #1808 erroneously removed the code that detected whether we are working with 2d or 3d data. however, it is possible to call trackpy spot detection with `is_volume=False` and...

Combiner Pipeline component that muxes ImageStacks

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Criteria for completion: - [ ] should work automatically if ImageStacks do not have overlapping r/c/z - [ ] should support a mux map that allows one to reassign r/c/z...

Once we support passing ImageStacks from process -> process, we need a way to coordinate how much parallelism the individual processes kick off. Each process will see a system with...