Daniel Fürth
Daniel Fürth
Looks like libopencv_calib3d.4.0.dylib is not found. Did you install OpenCV through ROpenCVLite? All the best, Daniel
Dont know about you environment but the way R looks for the OpenCV shared libraries is through these to commands to try to run in R console and check that...
You dont need to compile opencv yourself. ROpenCVlite will do it for you.
Hi @rgg2 this issue has nothing to do with WholeBrain but with your current Linux set up. It might therefore not be the best place to seek advice here. but...
@rgg2 What university and group are you at? Maybe I can point you to someone that could help you.
@Biglazyant you can see the error at the very end. ``` We detected these problematic arguments: args Did you misspecify an argument? ``` Devtools now uses the following to make...
Alternatively you can also do: ``` library(devtools) options(devtools.install.args = "--no-multiarch") install_github("tractatus/wholebrain") ```
Hi @Eason521 that github is not resolved as host would indicate that you are behind some sort of proxy. If you are at a university or similar talk to you...
@matiasandina This has to do with the original Allen brain atlas. The style record is imported from the SVG files. If there is no style entry then none will be...
Hi Did you run segmentation and selected a threshold for where to find the brain section in your image? Without it the algorithm will default to Outsu threshold which requires...