Torgheh

Thanks for your amazing work. I've been using DESC for a while now and no matter what dataset I use I always get these strange looking UMAP plots. tsne looks...

Co-localization of cell types using cell type maps

1

Hello, First, thanks for your amazing method and easy-to-follow tutorials. I've used your method to analyze a Visium generated dataset. Our H&E images have low resolution and we can not...

Hello, I am running your script in an Ubuntu (20.04) machine with a "NVIDIA Corporation GP104GL [Quadro P4000]" graphic card. I also have the latest version of the graphic card...

Hello, Thanks for your great work. I've been following the development of your method and its' implantation in Scanpy and can't wait to start using it in my future analyses....

Mouse data

1

Hi, Is it possible to use this tool with mouse data? if not, Is there a way to train our own models? Thanks for your time.