Tommaso Leonardi

Results 15 comments of Tommaso Leonardi

Stack smashing detected

Looks like a duplicate of #128

transcriptome mode for post-alignment QC

Hi @meydaria, thanks for the report. We will fix this problem with the next release. tom

SampCompDB plot position error

Hi, sorry for the lack of activity. Do you get an error also if you plot different positions? If you do, can you share a minimal SampCompDB so that I...

The result database does not contain metadata

Hi, it looks like there's something wrong with outSampComp.db. How did you generate it? Can you provide the log files of sampComp?

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I have to look into the issue more carefully, not sure why/when it happens, but it happened more than once already. @a-slide do you have any idea?

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Ok, it looks like I figured it out. On my system numpy is built against openBlas, which by default is multithreaded. The result is that the np.array() call in __process_references()...

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This should be fixed by #94 but I haven't tested it yet. Did you?

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I think it's fixed

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But it's not, reopening.

Use a peak calling algorithm to call significant positions from the pValue graph

This is something to consider for a future update. I've added it to the Version 2 milestone.