thomasmanke
thomasmanke
Would it be possible to define a default section (e.g. [default]) to set global parameters for all tracks? This would also allow to simplify the output of make_tracks_file, which currently...
PoolingViewSet in pooling/view.py might need inclusion of the following definition: serializer_class = PoolSerializer for now it seems to work, but (without this line) some installations have produced 500 error upon...
/home/pipegrp/repos/10X_snakepipe/10x_scRNA/Snakefile:6: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. globals().update(yaml.load(f))
Can we `multiqc --zip-data-dir`? https://github.com/maxplanck-ie/snakepipes/blob/7df9bd36ae5fff9f47f5c6e3974f4147146f9656/snakePipes/shared/rules/multiQC.snakefile#L148 This would only be a small gain in storage, but it would deal with group permission issue encountered in BRB. See: https://github.com/maxplanck-ie/BigRedButton/issues/100#issuecomment-2465967725 Not sure if...