João Cardoso

Results 5 issues of João Cardoso

When merging pathways with other manipulations, knock-in targets should be placed first to avoid missing identifiers when applying the remaining targets.

bug

Hi. I was trying to search for some compounds using cameo. When I run `cameo search "poly-γ-glutamic acid"` I can find an hit. ``` Loading product database ... Searching product...

bug
to verifty

Hi! We should support metabolite turnover as in: Brochado, A. R., Andrejev, S., Maranas, C. D., & Patil, K. R. (2012). Impact of stoichiometry representation on simulation of genotype-phenotype relationships...

enhancement

Prevent cameo to knockout hard-fixed constraints such as ATPM during heuristic optimization process. Suggestions: do not knockout reactions with fixed constraints other then 0.

bug

Hi, I got problems compiling the code at ubuntu. To solve them you just need to add and change to in your stactive_record.h file. Best Regards