tetedange13
tetedange13
### Description of the bug Hi ! I am trying to change my container used for `viralrecon` from Docker to Singularity I have installed Go (v1.19.1) + Singularity (v3.5.3) and...
Hi, I tried to answer myself some issues about CNVkit and in my tiny experience, people tend to give **too little details about what they were doing** experiencing their bug...
Hello, I am trying to **use MarginAlign with the last release of Minimap2** (`2.15-r908-dirty`) and I had several issues: 1) I had this mysterious PySam error, that has not yet...
Hi there, First thanks for developping Miniwdl, I find it very useful ! ## Context I am running Miniwdl on a given task (= with `--task` option), which takes a...
### Description of feature Hi all, I noticed that when running assembly with Minia twice with exact same parameters, produced assembled genomes are slightly different => This is something known:...
### Description of feature Hi, Thanks for `viralrecon`, this is really an amazing tool ! I manipulated BLAST results produced by the pipeline when running it on Flu hybrid-capture data...
### Description of feature Hi, This is probably related to issue https://github.com/nf-core/viralrecon/issues/113#issuecomment-1034362913 We are trying to shift from a detection of solely Sars-cov-2 (using Artic primers) to a more "metagenomics"...
Hi, First thanks for developping `somalier`, it is a great tool ! In my team we have exome data, with pooled parents, most of the time 4 mums and 4...
Hi, First, thanks for developping `bohra` ! ### Context Version of `bohra` : 2.3.2 I installed `bohra` through `conda` and ran `bohra init` But then running `bohra run --pipeline preview`,...
Hi, ## Context I did not want to mess up my good old Conda install and [Biocontainers' Docker image for Bohra](https://quay.io/repository/biocontainers/bohra?tab=tags) only has `bohra` itself (and `conda` is absent so...