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                                            Krishna

How to fix this AssertionError?

Hi @SamStudio8, I'm also running into this problem. Was it simply a matter of changing all nucleotides in the reference to UPPERCASE? I'm testing Rebaler on a draft Eukaryotic genome....

How to fix this AssertionError?

Thanks for that tip! On the off chance, do you remember what variable comparison you turned case insensitive? It looks like the match_count assertion is int to int?