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                                            Kaitao Lai

Error: could not find function "simplify" when I run metacoder::filter_taxa

Hi, I followed the instruction from https://grunwaldlab.github.io/metacoder_documentation/workshop--05--plotting.html > load("filtered_data.Rdata") > library(metacoder) > obj %>% filter_taxa(grepl(pattern = "^[a-zA-Z]+$", taxon_names)) %>% # remove "odd" taxa filter_taxa(taxon_ranks == "o", supertaxa = TRUE) %>%...

Error: could not find function "simplify" when I run metacoder::filter_taxa

I have tested it, it is working now. Thank you for your help.

The taxon list table for the differential heat tree

Thank you very much for your help! Your script is very useful.

Alpha-diversity assessed by richness (Chao1, ACE)

That made sense. Thank you for the suggestion.