Aleksandr Tanas
Aleksandr Tanas
Is it possible to use kalign with a custom substitution matrix, with sequences of the custom alphabet?
### Description of the bug Hi! I am trying to run the nf-core/sarek pipeline using the configuration file [test_full.config](https://github.com/nf-core/sarek/blob/5fe5cdff171e3baed603b3990cab7f7fd3fcb992/conf/test_full.config) and I encounter the following error: ``` Error executing process >...
Cloud Pipeline pipe cli is required to access the Cloud Pipeline platform instance. The extension will download pipe cli, and configure it while connecting to the platform. The 'remote-cp-helper' extension...
A new command line option `--no-putty` prevents handling putty configs and .ppk keys with `tunnel start --ssh` command. This approach lowers `tunnel start` command time by 10 sec.
NextFlow demo pipelines have been added to the dedicated repository [https://github.com/epam/cloud-pipeline-demo-workflows](https://github.com/epam/cloud-pipeline-demo-workflows). Tools docker images required by the demo NextFlow pipelines added (nextflow:25.02.3-edge and al-docking:1.0.0).