Pedro Szekely
Pedro Szekely
@CraigMiloRogers KGTK should warn users when they provide inputs that KGTK does not expect. I read all of @CraigMiloRogers 's comments but I still don't understand. - kgtk cmd -I...
Hi Giorgio, thanks for your interest in KGTK. KGTK does not directly support SPARQL. KGTK provides a command to output a KGTK knowledge graph as triples https://kgtk.readthedocs.io/en/latest/export/generate_wikidata_triples/ so you load...
KGTK does not support sub-queries. However, KGTK supports chaining of queries, so you can run one query, produce a TSV file and use the output TSV file as input to...
I tried ``` pip install importlib-metadata ``` but the error persists
I am using `Python 3.7.9` ``` (kgtk-env) MacBook-Pro:temp.schwarzenegger pedroszekely$ pip freeze altair==4.1.0 ansiwrap==0.8.4 anyio==2.0.2 appdirs==1.4.4 appnope==0.1.2 argon2-cffi==20.1.0 async-generator==1.10 attrs==20.3.0 Babel==2.9.0 backcall==0.2.0 beautifulsoup4==4.9.3 black==20.8b1 bleach==3.2.2 blis==0.4.1 cached-property==1.5.2 catalogue==1.0.0 certifi==2020.12.5 cffi @...
Now I am in KGTK installation nightmare. I saw the following error, and now my notebooks don't work. During installation I get the following error: ``` ERROR: Command errored out...
After fixing the installation problems, the embeddings still error out: ``` INFO:torchbiggraph:Loading entity counts... INFO:torchbiggraph:Creating workers... INFO:torchbiggraph:Initializing global model... INFO:torchbiggraph:Starting epoch 1 / 100, edge path 1 / 1, edge...
Assigning to @saggu for now as @CraigMiloRogers is out on vacation and sounds like this is urgent
I ran outside Jupyter with the KGTK_TEMP variable and get the same error: ``` (kgtk-env) macbook-pro:tutorial-network-analysis pedroszekely$ kgtk graph-embeddings -i arnold.family.tsv -o arnold.family.embeddings.txt --dimension 30 INFO:torchbiggraph:Loading entity counts... INFO:torchbiggraph:Creating workers......
@saggu Please give it a try on your machine. It is the last cell in https://github.com/usc-isi-i2/kgtk/blob/dev/tutorial/kg-network-analysis.ipynb