Joshua Adelman
Joshua Adelman
I noticed when running py-spy (v0.3.3) against some production code on a Linux machine that around 60% of the time spent was attributed to about half a dozen or so...
On pypi, `0.0.2.28` and `0.0.2.29` have the license file included in the source distribution, but `0.0.2.30` does not include it. I'm having trouble tracking down what changed. Any ideas? It's...
It would be helpful to include the license file in the source distribution.
I was wondering if there was a trick one could use to cluster on a subset of frames (strided) during that step in a `Pipeline`, but then use the full...
There is a problematic bit of code in the `ExecutablePropagator` that can mishandle setting dataset loaders during initialization when the `rc` has already had it's loaders set: https://github.com/westpa/westpa/blob/master/src/west/propagators/executable.py#L165-L171 ```python loader_directive...
While trying to run the `test_kinetics` from `west_tests` repo, I noticed that the analysis wasn't properly reading the `bins_from_file` argument. If you look at: https://github.com/westpa/westpa/blob/master/lib/west_tools/westtools/binning.py#L325 `bins_from_file` is missing from the...
_Migrated from Redmine issue tracker_ Author: @mczwier Date: 9/26/2013 Description The current pre-iter/post-iter mechanism is usually used for cleaning up running simulations as they go. They are dispatched as wwmgr...
I'm starting an issue here and copying some discussions I had with @mczwier a while back to aid in coming up with a reasonable solution: ``` On Fri, Jan 3,...
_Migrated from Redmine issue tracker_ Author: @mczwier Date: 10/16/2013 Description Bin labels for the RecursiveBinMapper do not appear to correspond to the bins they should. For example, in a (particularly...
_Migrated from Redmine issue tracker_ Author: @synapticarbors Date: 8/17/2013 Description When the configuration parser reads the `max_run_wallclock` time from west.cfg, it is sensitive to the format. For example `max_run_wallclock: 3:00:00`...