svittoz

## Description [pyarrow patch](https://github.com/aphp/eds-scikit/pull/52) in last release fails when it is run by spark executor. This PR fix this issue by specifying the python path the executor must look for...

OMOP explorer

1

## Description Add Altair visualization tools for any OMOP table in the model of the [Biology](https://github.com/aphp/eds-scikit/pull/51) module. ## Checklist - [ ] If this PR is a bug fix, the...

## Description `eds_scikit.period.stays.merge_visits` function outputs non-deterministic results due to koalas `sort_values(...).first()` not working as expected. We add the `sort_values_first_koalas` function for replacement. ## Checklist - [ ] If this PR...

eds.measurement improvements

2

## Description - add **table processing** in eds.measurements - add the possibility to extract **all measurements** - update eds.measurements config to extract **more units** ## Checklist - [ ] If...

Fix undeterministic merge_visits

2

## Description - Fix undeterministic merge_visits due to `sort_values(...).groupby(...).first()` being undeterministic in Koalas. - Force user to provide `open_stay_end_datetime` to prevent from unexpected undeterministic results. ## Checklist - [ ]...

Adding possibility to select cim10 and atc in eds.cim10 and eds.drugs

2

## Description Currently, `eds.cim10` and `eds.drugs` does not allow to select cim10 or ATC of interest, resulting in high computational time when used. TODO : see also `eds.umls` ? ##...

Adding warning message to merge_visits

2

## Description ## Checklist - [ ] If this PR is a bug fix, the bug is documented in the test suite. - [ ] Changes were documented in the...