Ye.S

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这个功能已经实现了,但是使用起来有点麻烦。可能还没有来得及完善。 ![图片](https://user-images.githubusercontent.com/71215104/180161799-ab7bd79d-ee81-4516-a147-0353e1daa878.png) 你需要在文档开头添加[TOC]然后在导出的弹窗中设置“Table of Content”的Title::名字,就是目录名,然后导出时就可以获得带有目录的PDF文档。 The feature you want has been implemented, but there are some steps before exporting. You need to add `[TOC]` ahead of the markdown file or...

I think it's a good idea.

I think u can create CellChat from SeuratObj directly,rather than a normalized data matrix.😊

@LeonSong1995 Hello! Thanks for your attention to CellChat. As for the stereo data, we have figure out how to compute communication probability with a true scale.factor for the bin-based approach....

@LeonSong1995 Hi~ o(* ̄▽ ̄*)ブ Firstly, CellChat uses real distances (measured by the International System of Units, such as $\mu m$ & nm...) as distance constraints when calculating the probability of cell...

@Li-ZhiD OK, now we use two parameters in `scale.factors`: `ratio` and `tol`. The two parameters `spot.diameter` and `spot` which we used previously are related to the `ratio` parameter at present....

I had the same problem, did you solve it?