Soumya Sharma
Soumya Sharma
@sqjin Thank you for your prompt response. Yes, here you go. One thing to bear in mind would be that my Seurat object (inside R environment) is 7.8GB. That shouldn't...
@sqjin Would be fantastic if you could see what the issue is here and why it isn't running.
@sqjin Some more information on this error.
@sqjin . Managed to fix this error by changing the syntax of a code chunk found in the source code. [Source Code](https://rdrr.io/github/sqjin/CellChat/f/) > [R/utilities.R](https://rdrr.io/github/sqjin/CellChat/src/R/utilities.R). FROM: ``` my.sapply
@sqjin Not sure what's going on here. So for the functions `identifyOverExpressedInteractions`, `identifyOverExpressedGenes` changing this code chunk: ``` my.sapply
CHANGING THIS: ``` my.sapply
Hi @sqjin I was wondering if there's anything you could say about this? Thank you for your help so far!
@sqjin Unfortunately, it still does not run. I was wondering if there's anything else that could be done?
@sqjin Did exactly that and it fixed the problem. For anyone facing the same problem here's the preview of the changes made in the source code, specifically in the netEmbedding...