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                                            styounes

computeCommunProb: Error in nn.ranked[idx.i, ] : subscript out of bounds

For what it is worth, I ran into this issue as well. The problem in my code was that GetTissueCoordinates() returns only the coordinates for the first sample/image in the...

Perturbation will not run when only using n_cells for Jacobian calculation

I down-sample the Jacobian calculation because my current compute environment has only 128 GB of RAM. Attempting to calculate the Jacobian on more than ~5,000 cells usually crashes the environment...