stetner

masurca 4.0.9 reports version as 4.0.5

2

In the mascura 4.0.9 code: ~/90days/build/MaSuRCA-4.0.9 grep '4.0.5' */*/*/* 2>/dev/null ... global-1/SuperReads/src/masurca:my $version_str="version 4.0.5"; ... So after build 0f 4.0.9 source: $ masurca --version version 4.0.5

Error on install Linux R/4.2.0

2

Getting this trying to install on: CentOS Linux release 7.7.1908 (Core) R Under development (unstable) (2022-02-17 r81751) -- "Unsuffered Consequences" Any ideas? Thanks, Doug > library(rJava) > .jinit() > .jcall("java/lang/System",...

Job name has an ampersand in it

11

v0.9.20161222 ``` CRITICAL - Line: 807140.delta Lambda&S10 haotian.teng 22:41:42 R gpu ``` not properly parsed by regex expression. Unexpected character.

Feature request: GECOS -> GECOS and Group

7

Hi Sotiris, Lately I have been adding this to my qtop.py: ``` d.stetner 18619 $ diff qtopnew/qtop.py qtopdgs/qtop.py 1536c1536 < ' GECOS field or Grid certificate DN |'} --- >...

colorize producing strange results

2

When I set colors that are supposed to have backgrounds I see strange spacing of the output (s.bent and l.brillault lines): These are the settings in colormap.py: ``` $ egrep...

VEP install fails due to cvs.sanger.ac.uk not being online

1

Checking for installed versions of the Ensembl API...done Setting up directories Downloading required files - fetching ensembl ** GET http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/ensembl.tar.gz?root=ensembl&view=tar&only_with_tag=branch-ensembl-74 ==> 500 read timeout (180s) ERROR: Failed to fetch from...