John Sterrett

@whipkreme Are you trying to install it on a Mac with M1/M2 chip (ARM architecture)? I was having this issue on my Mac that was resolved when I used `CONDA_SUBDIR=osx-64...

Hi @mrgambero and @Hela06, I've been working on a fix to this issue. I believe it's actually an issue with KEGG_parser, rather than AMON itself. Sorry about the delay on...

Hey @mrgambero, good news! We think we have the issue in `KEGG-Parser` that was causing this patched, and I just pushed the new version to PyPI. Could you run `pip...

Hi all, I believe I've fixed this issue with the [latest release of KEGG_Parser](https://github.com/lozuponelab/KEGG_parser/releases/tag/0.0.6) (which is now bumped to 0.0.7 to fix pip compatibility issues). If the asynchronous downloads are...

Hey @raeshrode , that's weird - I'll look into it! In the meantime, can you post the error from your computer + all the versions for your packages (output of...

Hey @raeshrode , it looks like KEGG_parser is requesting a weird url... In that last line, `htto://rest.kega.ip/aet/K14648+K13903+K06473+K07522+K09456+K12076+K23204+K06910+K04999+K09203` should be `http://rest.kegg.jp/get/K14648+K13903+K06473+K07522+K09456+K12076+K23204+K06910+K04999+K09203`. (htto -> http; kega -> kegg; ip -> jp; aet...

I tested with @raeshrode 's data and was getting the 403 error but no weird url. I think KEGG now "forbids" requests for longer once a requester is "banned"... That...

Hey @acolorado1 , I think it should be able to read .csv files, based on the section of the KO reader function linked here: https://github.com/lozuponelab/AMON/blob/0764de2eecf9bdc5488318259b49b220197a1821/AMON/predict_metabolites.py#L59 How is your CSV file...

Hey @jenniferlu717 - we (@jboconnor13 + me) have also dealt with this issue, which we addressed by manually updating bracken-build based on what you did in https://github.com/jenniferlu717/Bracken/commit/05d695c5a8c09849c7144fa2ba9cbac81af0e166 and https://github.com/jenniferlu717/Bracken/commit/d7f63d8ff9d7d9c1bcf31d62f0ee642d6fd3d8c5. When...

@DaHye0205 did something you did solve the issue, or is the conda installation now working for you?