Steven Roberts

You should not be annotating genomes.... just genes l On Wed, Nov 5, 2025 at 3:43 PM Grace Crandall ***@***.***> wrote: > *grace-ac* left a comment (RobertsLab/resources#2369) > > >...

Fastas…. On Wed, Nov 5, 2025 at 3:52 PM Grace Crandall ***@***.***> wrote: > *grace-ac* left a comment (RobertsLab/resources#2369) > > > pycno: 29-deseq2-pycno/DEGlist_transcripts_pycno_controlVexposed.tab > > > pisaster: > 30-deseq2-pisaster/DEGlist_transcripts_pisaster_controlVexposed.tab...

For every species you should have a fasta file of genes. (coding sequence) For pisaster it should have header like - g7932.t1 On Thu, Nov 6, 2025 at 7:12 AM...

Same files that you blasted prior to get annotation of genes? On Thu, Nov 6, 2025 at 7:40 AM Steven Roberts ***@***.***> wrote: > For every species you should have...

404: Not Found On Mon, Nov 3, 2025 at 4:31 PM Grace Crandall ***@***.***> wrote: > Assigned #2368 > > to @sr320 > > . > > — > Reply...

I cannot access.. you would count the occurrence of GO terms listed

See https://github.com/grace-ac/project-pycno-multispecies-2023/blob/main/output/33-annot-DEGlists/GO_terms_summary.md and separate GO term summary for each file in 33-annot-DEGlists

yes all the same. On Wed, Sep 18, 2024 at 2:46 PM Noahk22 ***@***.***> wrote: > Just to confirm, Bag 30a and Bag 30b are pictures taken of the same...

@Noahk22 be sure to notebook post at https://genefish.wordpress.com/

Can you show head of alignment/ Deseq output so we know what to match... and go ahead and add head / description of what genome files are available here. (Updated:...