sjfleck
sjfleck
I just had the same error. I installed the gkStore::gkStore module in my perl and restarted the assembly, but it didn't seem to solve the problem. It's been about a...
I had this same problem earlier today. Did you ever find a solution?
> Any luck? I am trying to install it now and have the same problem. I was mistaken when I tried this installation method. I believe it's just for developers...
Thank you for this fix! I didn't notice it before leaving my own comment about the exact same issue.
I fixed the error. I strangely included "MAX_SEQ=10000000" in my command and the program wanted to remind me that wasn't a real option for cd-hit-est. I removed it from the...
I'm having this exact issue right now. Did you ever find an answer or solution to this?
From my experience, lower -t15 to -t10 and run all of your samples again. If you still get a straight line for some species, try -t5.
Hi, I'm having a similar issue that you're describing. I'm doing a de novo assembly for my species and I'm not exceeding my memory capacity or time limits, but I'm...
Hi, I'm having the same issue. I'm rerunning a job that worked successfully in July, but is now failing to get past the very first step in Miniasm ([M::main] ===>...
The weird thing for me is that I've successfully run this exact assembly before. This is what I'm doing: minimap2 -x ava-ont -r 10000 -t 16 reads.fastq.gz reads.fastq.gz > overlap.paf...