sitr1014

foldchange is not shown in cnetplot

2

Hi, I am trying to use the very basic function of "cnetplot" to show enriched pathways and the corresponding gene expression changes within the enriched pathway. I am doing this...

Blacklist region handling

1

Hi, I am curious when I use epic2 to do the peak calling, how does it handle the blacklist regions? Is there a built in/default blacklist filtering or we need...

Epic2 running error caused by chromosome names in my alignment file

1

Hi, I got an error when running epic2 as below: --- Logging error --- Traceback (most recent call last): File "/panfs/roc/msisoft/anaconda/python3-2020.07-mamba/lib/python3.8/logging/__init__.py", line 1081, in emit msg = self.format(record) File "/panfs/roc/msisoft/anaconda/python3-2020.07-mamba/lib/python3.8/logging/__init__.py",...