Simon C Chu

CalledProcessError: Command xcmp

8

Hi, I am comparing two vcf file, and get the following errors: ``` [W] overlapping records at 1:6799149 for sample 0 [W] Variants that overlap on the reference allele: 1346...

RUNNING iASSEMBLER failed

5

It has reached the `RUNNING iASSEMBLER ` step: ``` earlier logs... ###UPDATE WITH PASA DATABASE STARTED AT: 03:39:16 17-03 ### ###CREATING CONFIGURATION FILE### ###LOADING GFF3 FILE INTO DATABASE### ###UPDATING GFF3...

Question from https://github.com/parklab/xTea/issues/20 > Hi, I tried using >5900bp as the cutoff for the full length L1. I run hg38 first to see whether I can reproduce the result in...

KeyError on RNA-seq data

2

Hey Daniel, I met this error when try to run bamsnap on a rna-seq bam file: ``` Process proc 1: Traceback (most recent call last): File "/home/cc439/anaconda3/lib/python3.7/multiprocessing/process.py", line 297, in...

Error when running TEMP

7

Hi, I get this error when running "TEMP_Insertion.sh": ERROR: Received illegal bin number 262143 from getBin call. ERROR: Unable to add record to tree. Possible reason for causing this? Best,...