silvainp

Error: Ungapped alignment step died Error: linclust died Error: Search died

3

Hi all, thanks for this MMseqs2 that seems very efficient. Unfortunately it seems to not be willing to run on my machine : mmseqs easy-cluster /Users/s/Documents/Albatros/protein//short_name-Group/true_plus300_proteins-13-strains_shortname-group.fa /Users/s/Documents/short_name-Group/clusterRes /Volumes/s/tmp --min-seq-id 0.5...

Hi @atarashansky, We are using SAMap to compare Drosophila and Anopheles data. So far we are happy with the analyses but we struggle to smartly extract the pairs data to...