Shun Li

Can't install caimanmanager.py in macOS

13

For better support, please use the template below to submit your issue. When your issue gets resolved please remember to close it. Sometimes errors while running CNMF occur during parallel...

read_plexon() ValueError: When changing to a larger dtype, its size must be a divisor of the total size in bytes of the last axis of the array

3

Hi, We're loading a .plx file using read_plexon() method. We know the code runs because a sample short (~1min) .plx file (acquired directly in .plx) runs in our code successfully....

timeout error when spike sorting with container

24

Hi, I'm recording using neuropixel 2 probe and running kilosort for each shank on docker image. My code is as follows: `sorting = si.run_sorter_by_property('kilosort3', rec, grouping_property='group', working_folder= base_folder/'kilosort3_output', mode_if_folder_exists="overwrite", docker_image=True,...

stream_names not found during sorting

5

Hi, I'm running NP2 recording using spikeinterface. I've been following the neuropixel notebook provided in the documentation and everything runs smoothly until spike sorting, where theres an error saying that...

MacOS: failed to commit or detect local changes

3

### The problem Hi, I have a repo rested on a server from our school and github desktop used to work perfectly but suddenly following error occured. 1. Initiaially, github...