BioWalker

gseGO Error in preparePathwaysAndStats(pathways, stats, minSize, maxSize, gseaParam, : Not all stats values are finite numbers

11

我运行gseGO函数，返回如下错误 > ```r >Error in preparePathwaysAndStats(pathways, stats, minSize, maxSize, gseaParam, : > Not all stats values are finite numbers > ```

velocyto run OSError: no BGZF EOF marker; file may be truncated

4

when I run velocyto like this: >```r >velocyto run -b /home/shijian/scvelo1/ESCA-5-post-T_.tsv -m /home/shijian/scvelo/human_rmsk.gtf /WFDATA/yang_res_z/0901cp/ESCA-5-post-T/outs/possorted_genome_bam.bam /home/shijian/scvelo/genes.gtf -o /WFDATA/yang_scvelo/ESCA-5-post-T > and I got error as follow: > ```r >Traceback (most recent call...

The correspondence between genes and regulatory elements in each cell type can be clearly demonstrated, and the differences in regulatory programs between cell types can be clearly illustrated

scvelo() ImportError: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by /home/shijian/.cache/basilisk/1.2.1/velociraptor-1.0.0/env/lib/python3.7/site-packages/pandas/_libs/window/aggregations.cpython-37m-x86_64-linux-gnu.so)

4

I run scvelo() following the demo: ``` > velo.out

scVelo() Error in installConda() : conda installation failed with status code '1'

3

When I try to run the scvelo() function I get the following error message (see attached picture).