Ryan Sheridan

* The `import_vdj()` function is too long, divide into smaller functions

informative error messages

1

Need informative and consistent error messages: * When the specified chain (provided to `chain` argument) is not present in the data (e.g. if you try to select a TCR chain...

* allow user to select specific chain for calculating frequency

trim dependencies

2

* move as many as possible to Suggests and use conditionally

Potential Features

3

- [ ] Antigen affinity score * Incorporates AVID-seq counts and total receptor counts (CITE-seq/GEX counts) - [x] Add VDJ data from cellranger to Seurat object - [x] Receptor diversity...

Get complet TCR seq for cloning seq

B cell lineaging/clustering

3

* Best methods for clustering

Argument to debug cell barcode overlap when trying to load VDJ data