shen

set threads=12 but still submit single cpu job to the cluster

9

Do I need to add 'cpus=12' to the nextflow configure file? But this may cause all jobs with a requirement of 12 logic cpus.

Any domcuments for CCC method developers?

1

In other word, is there anyway to **benchmark a new CCC method** by using LIANA?

the integration results from liger object and seurat object are different

2

I followed the code from the usage page. I found the UMAP results are different: start from liger object : https://welch-lab.github.io/liger/articles/Integrating_multi_scRNA_data.html start from seurat object : https://welch-lab.github.io/liger/articles/liger_with_seurat.html#move-on-to-seurat-downstream-analysis-after-liger