LinyongShen

`list index out of range` of `hicMergeDomains`

1

This software you have developed is fantastic! But I have a problem when I use the `hicMergeDomains` to merge TAD files in multiple resolutions, how should I solve it? ```bash...

Thank you very much! The juicer software is very powerful and useful.I got the .HiC data using juicer software default resolution(Maximum resolution is only 5kb ) and merged the biological...

Hello! I would like to know if "mega.sh" has its own parameters for setting the resolution, I need the data in 1kb, 2kb resolution.

How to solve the ‘Too many open files’ problem

2

##My CPU version HiCPro reported an error： ```bash Fri Jul 16 02:13:33 EDT 2021 Mapping statistics for R1 and R2 tags ... Logs: logs/fat1/mapping_stats.log Logs: logs/fat2/mapping_stats.log Logs: logs/fat3/mapping_stats.log Logs: logs/lean1/mapping_stats.log...

TAD alignment problem between two samples

1

Thank you for developing such great software, I would like to use the class you wrote for `tadlib.hitad.aligner.DomainSet` class to find the difference TAD. However, I don't understand what the...

I am reaching out to seek your expert advice regarding a specific technical challenge I have encountered. I need to modify chromosome identifiers in a .hic file; specifically, I aim...