Shaun Kandathil

Replacing the compile command with `rm -rf ../obj/* && CXXFLAGS=-DPARAM_OLD cmake ../src && make -j` seemed to do the trick. It appears the config scripts are still writing 'old-style' parameters...

That's weird; I've tested the example on a Linux system with 32G of memory and it runs fine. Although memory requirements will scale with the length of your target sequence,...

Hmmm, I can't reproduce this on a CentOS 7 system. A few things to try/check: Try deleting the `__pycache__` directory in `deepmetapsicov_consens` Is this Ubuntu a virtual machine by any...

I must say I'm stumped. I cannot work out what's going wrong. I notice that your test directory contains PSIBLAST output files that shouldn't be created for the test job....

Hi, apologies for the delay. The underlying issue seems to be that there was no NumPy 2.0 when PyTorch 1.8 was released, meaning that now we need to explicitly ask...

Just leaving this note here for anyone who might consider this: This change will indeed need to be pulled if we ever intend to support newer GPUs, for example. However,...