Darya Sharkova

Results 8 issues of Darya Sharkova

**Summary:** When including two interfaces with a method of the same name in each, an error is thrown; when including an interface that includes them both, the last definition included...

Create a file with this line: include: "https://bitbucket.org/snakemake/snakemake-wrappers/raw/0.36.0/bio/bcftools/call/wrapper.py" And try to go to definition (standard hotkey Ctrl + B) on this URL. Normally an html file would be downloaded and...

bug
subtask
3rd party

`input` can be used as a lambda parameter name for `params` section (see [snakemake docs for params](https://snakemake.readthedocs.io/en/stable/snakefiles/rules.html#non-file-parameters-for-rules)), it's probably best not to highlight a valid parameter name. ![image](https://user-images.githubusercontent.com/12707841/61534191-8c94dc80-aa37-11e9-9f53-cccb89940973.png)

bug
inspections
3rd party

![image](https://user-images.githubusercontent.com/12707841/60879574-8be79380-a24a-11e9-9b31-647bab2b9c26.png) File `file.smk` belongs to the current project, thus resolve works. File `WorkflowLocalrules.smk` is fetched from another path, resolve doesn't work.

bug
codeInsight

rule foo: output: "file.txt" input: "input.txt" shell: "echo hello" rule boo: input: ... If the entire file is indented with tabs but a rule section, e.g. `output`, is indented with...

parsing

`snakemake` script run creates a `.snakemake` directory in the working directory. There can be a `shadow` directory in `.snakemake`, which contains symlinks to files in the current workdir; this results...

usability problem

Apologies if such a feature is already present, I couldn't find it in the project. Could I request an API method to stop the debugger once it's been loaded? I'm...

Not sure if it's a JRuby issue or an sqlite3 issue, but the problem looks similar to [this one](https://github.com/sparklemotion/sqlite3-ruby/issues/634), only it occurs not on rockylinux but on Ubuntu and with...