Wenqian XU comments

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                                            Wenqian XU

Error with download_eggnog_database.py

> Hi Juan Pablo, > > I don't understand what is happening. I did a fresh conda install, and I can find both emapper.py and download_eggnog_database.py in the PATH. >...

Error with download_eggnog_database.py

> Hi @shanexuuu, > > What is the output of the `which` command for both `emapper.py` and `download_eggnog_data.py`? > > Just as a note, it seems weird to me that...

TypeError: cannot unpack non-iterable NoneType object in run_microbe_census.py

Hi, Nope. I fount RPKG and RPKM result are highly similar. So I switched to RPKM and also TPM. 发件人: Luyao Kang ***@***.***> 发送时间: 2024年3月8日 15:51 收件人: snayfach/MicrobeCensus ***@***.***> 抄送:...

TypeError: cannot unpack non-iterable NoneType object in run_microbe_census.py

I see. Thank you very much! Best, Wenqian ________________________________ From: Jocker ***@***.***> Sent: Friday, March 29, 2024 10:04:33 AM To: snayfach/MicrobeCensus ***@***.***> Cc: XU Wenqian ***@***.***>; Mention ***@***.***> Subject: Re:...

[DISCUSSION] How to speed up interaction via anvio-interactive or anvio-refine on brower?

Thanks for your quick response! It helps a lot, especially "anvi-split". Another finding is if I use same Internet (such my university's local area network) for server and ssh, it...