Stephen Gaffney issues

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                                            Stephen Gaffney

n_alt_count and n_ref_count corrupted at recurrent sites in maf2maf reannotation

I've noticed in my last two runs of maf2maf that `n_alt_count` and `n_ref_count` can be altered during reannotation by `maf2maf.pl`. This occurs when a variant is present in multiple samples....

Should it be possible to `import ssl`?

A package that I'd like to use imports 'ssl'. Could you please advise if there is any way to make this available to a zeus-python kernel in jupyterlite? When I...