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                                            Sergey Isaev

Conversion 'py2rpy' not defined for objects of type '<class 'numpy.ndarray'>'

Hi @flying-sheep, @rimelof. Sometimes I have the same issue, and it seems, that in particular cases the porblem in `adata.obsm`. Here is an example. ``` adata_tmp = sc.AnnData( X=adata.X, obs=adata.obs,...

Conversion 'py2rpy' not defined for objects of type '<class 'numpy.ndarray'>'

Check Google Colab: https://colab.research.google.com/drive/1ywI3_QLOFddpw9edtNpK6-o_YA6l1kWM?usp=sharing

question about batch

Hi, @Flu09! First of all, if you're more familiar with R, it's better to use the original Symphony: https://github.com/immunogenomics/symphony Secondly, you can explicitly put information about batches during label transfer...