Serbulent Unsal

Calculating Lin's Similarity if a gene in the pair is not annotated

7

When the Lin similarity is calculated there are values over 1. Also some of the similarities for the same term pairs calculated as 0. I'm attaching a screen shot of...

Interaction fetch not continue after connection error.

9

When fetching interactions if any connection error occurs fetch process is ended. It might be good if there is a --max-try parameter to continue trying after this error. Error message...

Protein vector readability

4

Created protein vectors saved in a list by the getligprotvec.py in order to protein names in smiles_sample.txt. For big files it creates a readability problem. A dictionary might help for...