scuniff

I ran Fiji with Java debugger jdb and it does seem like the member variable **log** is null in the FileSystemTree$DirectoryWatcher constructor. Here’s what I’m seeing: I had a breakpont...

I was able to recreate the problem with showinf.bat from the bftools programs. I saw the problem go away when I increased the Java Max Heap size to 15g by...

I do see BF_MAX_MEM mentioned in this doc: https://bio-formats.readthedocs.io/_/downloads/en/v6.13.0/pdf/ Also, doing a Google search on BF_MAX_MEM shows several discussions about using BF_MAX_MEM.

Is this still a problem and re-producible? If so, can you do the following steps and then re-produce the problem with ImageJ? I do see in the code the potential...

Yes, I use SpotBugs https://spotbugs.github.io/index.html I use SpotBugs to find problems and to get myself familiar with the code so I can maybe get more involved. I’ve been using it...

I was able to re-produce the issue with the test image in Fiji. In Eclipse, I modified the code in https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ImspectorReader.java The changes are below. The variable **valueType** was 9...

Referring to the original code, "Time Time Resolution" is the value of variable **key** when the exception occurs at line 429. The exception occurs because it is doing a **readInt()**...

I’m fairly new to Bioformats and was interested in this issue. I did some research and found the following that may be related. I found this Bioformats link regarding NegativeArraySize...

Sounds good. I just completed getting bio-formats built in Eclipse. I think I need to read this link some to come up more to speed on using the API. 😎...

I’ve been trying the api mentioned in this link [Reporting a bug — Bio-Formats 8.0.0 documentation](https://bio-formats.readthedocs.io/en/v8.0.0/about/bug-reporting.html#common-issues-to-check). It mentions trying to open just part of an image with **openBytes(int, int, int,...