schmeing

``` src/AS_ENV/metagenomics_ovl_analyses.C: In function 'void init_frg()': src/AS_ENV/metagenomics_ovl_analyses.C:72:3: error: reference to 'prev' is ambiguous prev=olap.a_iid; ^~~~ src/AS_ENV/metagenomics_ovl_analyses.C:40:12: note: candidates are: int prev static int prev; ^~~~ In file included from /home/schmeing/.conda/envs/dolphin/x86_64-conda_cos6-linux-gnu/include/c++/7.3.0/bits/stl_algobase.h:66:0,...

I ran mapQuery and got the following error: `Error in exp_query[shared_genes, ] : subscript out of bounds` I manually repeated the steps from the function and noticed that up to...

Adding package for gapless. A python only assembly improvement tool that combines scaffolding, gap-closing and assembly correction with long reads. ---- Please read the [guidelines for Bioconda recipes](https://bioconda.github.io/contributor/guidelines.html) before opening...

``` `guides( = FALSE)` is deprecated. Please use `guides( = "none")` instead. ```

You check if `y` is a character and you set it to a factor first, so it can never pass this if statement. What you want to do is check...