Sebastian Bittrich

Results 13 comments of Sebastian Bittrich

Brief question: Does this fix a particular problem or is the motivation solely completeness? At least according to the docs it seems as treating D-amino acids as hetatms is the...

Below is the console output: ![Issue1](https://user-images.githubusercontent.com/9744615/194362230-126c3c60-b380-421c-a9ac-74180dc777f0.JPG) ![Issue2](https://user-images.githubusercontent.com/9744615/194362253-58e62f96-c3c6-4c14-972f-b161ac2c4c60.JPG) ![Issue3](https://user-images.githubusercontent.com/9744615/194362260-8ad6f2f7-4449-485a-996a-c2aa2a957d18.JPG)

No luck when updating Chrome or drivers. No additional messages in Firefox. Interestingly, Edge displays everything properly. I'll close this. Don't think we'll get any more data from the user....

You can use the `copy_all_categories` flag: https://molstar.org/viewer/?structure-url-format=mmcif&structure-url=https://wwwdev.ebi.ac.uk/pdbe/model-server/v1/1tqn/full?copy_all_categories=true

Thanks for the pointers. How about these changes? The focus surroundings now toggle `includeTypes` depending on the structure.

Maybe there's also something I don't get about `includeTypes` and `excludeTypes`. I assumed that removing `computed` from `includeTypes` would have the same effect as adding it to `excludeTypes`, but the...

Apologies for the late reply. So, the recommended way would be to customize these exclusions downstream?

Are you maybe requesting the gzipped file? https://files.rcsb.org/download/4HHB.cif works, https://files.rcsb.org/download/4HHB.cif.gz doesn't.

Turns out that `database_2` isn't necessarily populated (e.g. for updated mmCIF: https://www.ebi.ac.uk/pdbe/entry-files/download/1tqn.bcif and https://www.ebi.ac.uk/pdbe/entry-files/1tqn_updated.cif). So, the snippet above doesn't help and detecting this is messier than expected.