Roshan Kern

Unable to load CH5 File

8

I am trying to analyze a .ch5 ([CellH5](https://github.com/CellH5/cellh5)) file in python. This file opens fine in ImageJ with the Bio Formats plugin, but python-bioformats throws an error when calling `bioformats.ImageReader(file.ch5)`....

Code rerun trigger cannot be ignored when using a script file.

5

**Snakemake version** 8.29.0 **Describe the bug** Code rerun trigger cannot be ignored when using a script file. This only seems to be the case when using the a script, not...