ricomnl

Hi, I've tried setting up the Ranked Batch Sampling Learner with a full dataset of ~2M samples and a batch size of ~8k samples. The code seemingly gets stuck after...

Saving credentials for sql connection

3

I'm looking to run a workflow in nf-tower that accesses a Postgres DB. When I run it locally I store the credentials in the nextflow config. Is there a way...

Adding and integrating a `load_h5ad()` function to load `.h5ad` Anndata matrices.

PDF parsing error handling

5

Hi, it would be useful if some error handling was added in case a PDF fails to parse. I earlier got this error after parsing 1000s of PDFs and had...

Is it possible to also scale the depth of the model?

5

In the paper and blog post you provide examples of scaling the number of layers / depth of the model but when I try doing this in the coordinate check...

Which datasets were included in train and which in val? Did you split by species or just random?