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prob_high = ifelse( .data$mean_ae_site_med75 == .data$mean_ae_study_med75, 1, .data$prob_high ) https://github.com/openpharma/simaerep/blob/dd5e9e7d39d20c4069775526ea2303d5c3120175/R/simaerep.R#L417 In this line we are setting the probability to 1 for site means which are equal (==) to study mean....