maes_microscopy

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Bumps [tqdm](https://github.com/tqdm/tqdm) from 4.66.1 to 4.66.3. Release notes Sourced from tqdm's releases. tqdm v4.66.3 stable cli: eval safety (fixes CVE-2024-34062, GHSA-g7vv-2v7x-gj9p) tqdm v4.66.2 stable pandas: add DataFrame.progress_map (#1549) notebook: fix...

dependabot[bot]

400 Client Error on Phenom-Beta Inference API endpoint

2

**Description** I am encountering a 400 Bad Request error when attempting to use the API's inference endpoint. However, uploading and deleting assets are working correctly without any issues. This problem...

l-haus

The code now supports dynamic loss weighting for the Fourier loss function. By setting dynamic_weight=True during initialization, the model can adaptively adjust the importance of the Fourier loss during training...

1Pravi

Bumps [torch](https://github.com/pytorch/pytorch) from 2.1.0+cu121 to 2.2.0. Release notes Sourced from torch's releases. PyTorch 2.2: FlashAttention-v2, AOTInductor PyTorch 2.2 Release Notes Highlights Backwards Incompatible Changes Deprecations New Features Improvements Bug fixes...

dependabot[bot]

Wondering about applicability of OpenPhenom-S/16 to non-homogenous mixtures of cells

1

Hello, I am working with data where the cells in a field of view/tile are not all of the same perturbation. Could I apply OpenPhenom-S/16 to get single-cell measurements of...

mat10d

packaged maes_microscopy

1

Packaged the software so it's easier to use as a dependency. To install the package get in the directory and run: ```bash pip install . ``` Example to import the...

LeonardoTredese

Hi! Thank you for sharing this excellent model and open-sourcing the RxRx dataset and associated resources. I found the paper and Huggingface documentation very insightful. While reviewing these materials, I...

jasperhyp

Foursheeps

## Proposed Change Adjust Fourier loss calculation for different dimensions. Currently, the loss dimensions expected are 2, but applying `mean(dim=-1)` on 4D inputs leads to issues.

fatwir

There is a small typo, and `self.num_bins` should be replaced with `self.num_modalities`

fatwir